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  "Title": "Storing, Manipulating and Analysis Spectroscopy and Associated\nData",
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  "Description": "Stores and eases the manipulation of spectra and\nassociated data, with dedicated classes for spatial and\nsoil-related data.",
  "URL": "https://github.com/pierreroudier/spectacles/",
  "BugReports": "https://github.com/pierreroudier/spectacles/issues",
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      "date": "2017-12-22"
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  "_exports": [
    "aggregate_spectra",
    "apply_spectra",
    "base_line",
    "big.head",
    "big.tail",
    "continuum_removal",
    "cut",
    "features",
    "features<-",
    "fill_spectra",
    "ids",
    "ids<-",
    "kenstone",
    "load_oz",
    "melt_spectra",
    "mutate",
    "plot_offset",
    "plot_stack",
    "plot_summary",
    "postResampleSpectro",
    "rbind.Spectra",
    "rbind.SpectraDataFrame",
    "res",
    "rnv",
    "separate",
    "snv",
    "spectra",
    "Spectra",
    "spectra<-",
    "SpectraDataFrame",
    "spectroSummary",
    "splice",
    "split",
    "subset",
    "wl",
    "wl_units",
    "wl_units<-",
    "wl<-"
  ],
  "_datasets": [
    {
      "name": "australia",
      "title": "Australia spectra library data set",
      "object": "australia",
      "class": [
        "data.frame"
      ],
      "fields": [],
      "rows": 100,
      "table": true,
      "tojson": true
    },
    {
      "name": "oz",
      "title": "Australia spectra library data set",
      "object": "oz",
      "class": [
        "data.frame"
      ],
      "fields": [],
      "rows": 5,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "spectacles-package",
      "title": "Storing, Manipulating and Analysis Spectroscopy and Associated Data in R",
      "topics": [
        "spectacles-package"
      ]
    },
    {
      "page": "aggregate_spectra",
      "title": "Aggregates spectral and data information",
      "topics": [
        "aggregate_spectra",
        "aggregate_spectra,Spectra-method",
        "aggregate_spectra,SpectraDataFrame-method"
      ]
    },
    {
      "page": "apply_spectra",
      "title": "Apply a function on the spectra of a Spectra* object",
      "topics": [
        "apply_spectra"
      ]
    },
    {
      "page": "australia",
      "title": "Australia spectra library data set",
      "topics": [
        "australia",
        "oz"
      ]
    },
    {
      "page": "base_line",
      "title": "Baseline correction using the baseline package",
      "topics": [
        "base_line",
        "base_line,Spectra-method"
      ]
    },
    {
      "page": "big.head",
      "title": "Return the First or Last Part of an Object",
      "topics": [
        "big.head",
        "big.tail"
      ]
    },
    {
      "page": "continuum_removal",
      "title": "Continuum removal",
      "topics": [
        "continuum_removal"
      ]
    },
    {
      "page": "cut",
      "title": "Manipulating the wavelength range of a 'Spectra' object",
      "topics": [
        "cut",
        "cut,Spectra-method"
      ]
    },
    {
      "page": "dimensions",
      "title": "Retrieve dimensions of Spectra* objects",
      "topics": [
        "dim",
        "dim.Spectra",
        "dimensions",
        "length",
        "length.Spectra",
        "ncol,Spectra-method",
        "nrow,Spectra-method"
      ]
    },
    {
      "page": "extraction-methods",
      "title": "Extracting and replacing parts of Spectra* objects",
      "topics": [
        "$",
        "$,SpectraDataFrame-method",
        "$<-",
        "$<-,Spectra-method",
        "extraction-methods",
        "[",
        "[,Spectra,ANY,ANY,missing-method",
        "[,Spectra-method",
        "[,SpectraDataFrame,ANY,ANY,missing-method",
        "[<-",
        "[<-,SpectraDataFrame-method",
        "[[",
        "[[,Spectra-method",
        "[[,SpectraDataFrame,ANY,missing-method",
        "[[<-",
        "[[<-,Spectra,ANY,missing,ANY-method",
        "[[<-,Spectra,ANY,missing-method",
        "[[<-,Spectra-method"
      ]
    },
    {
      "page": "features",
      "title": "Retrieves or sets the data slot of a SpectraDataFrame object.",
      "topics": [
        "features",
        "features,SpectraDataFrame-method",
        "features-methods",
        "features<-",
        "features<-,Spectra-method",
        "features<-,SpectraDataFrame-method"
      ]
    },
    {
      "page": "fill_spectra",
      "title": "Fill missing wavelengths of a Spectra* object with a given value",
      "topics": [
        "fill_spectra",
        "fill_spectra,Spectra-method"
      ]
    },
    {
      "page": "ids",
      "title": "Retrieves or sets the ids of a 'Spectra*' object.",
      "topics": [
        "ids",
        "ids,Spectra-method",
        "ids<-",
        "ids<-,Spectra-method",
        "ids<-,SpectraDataFrame-method"
      ]
    },
    {
      "page": "kenstone",
      "title": "Kennard-Stone algorithm for optimal calibration set selection.",
      "topics": [
        "kenstone",
        "kenstone,Spectra-method"
      ]
    },
    {
      "page": "load_oz",
      "title": "Load the australia dataset",
      "topics": [
        "load_oz"
      ]
    },
    {
      "page": "melt_spectra",
      "title": "Melts the spectra data of a Spectra object and returns it as wide format.",
      "topics": [
        "melt_spectra",
        "melt_spectra,Spectra-method",
        "melt_spectra,SpectraDataFrame-method",
        "melt_spectra-methods"
      ]
    },
    {
      "page": "mutate",
      "title": "Mutate a Spectra* object by transforming the spectra values, and/or adding new or replacing existing attributes.",
      "topics": [
        "mutate",
        "mutate,Spectra-method",
        "mutate.Spectra"
      ]
    },
    {
      "page": "plot_offset",
      "title": "Offset plot of a collection of spectra",
      "topics": [
        "plot_offset",
        "plot_offset,Spectra-method"
      ]
    },
    {
      "page": "plot_stack",
      "title": "Stacked plot of a collection of spectra",
      "topics": [
        "plot_stack",
        "plot_stack,Spectra-method"
      ]
    },
    {
      "page": "plot_summary",
      "title": "Summary plot of a collection of spectra",
      "topics": [
        "plot_summary",
        "plot_summary,Spectra-method"
      ]
    },
    {
      "page": "plot-Spectra",
      "title": "Plots an object inheriting from the Spectra class",
      "topics": [
        "plot",
        "plot,Spectra,ANY-method",
        "plot-Spectra",
        "plot.Spectra"
      ]
    },
    {
      "page": "postResampleSpectro",
      "title": "Calculates performance indictors across resamples",
      "topics": [
        "postResampleSpectro",
        "spectroSummary"
      ]
    },
    {
      "page": "rbind",
      "title": "Stacking 'Spectra' objects together",
      "topics": [
        "rbind",
        "rbind.Spectra",
        "rbind.SpectraDataFrame"
      ]
    },
    {
      "page": "res",
      "title": "Spectral resolution",
      "topics": [
        "res",
        "res,integer-method",
        "res,numeric-method",
        "res,Spectra-method",
        "res,SpectraDataFrame-method"
      ]
    },
    {
      "page": "separate",
      "title": "Separates a 'Spectra*' object into a calibration and a validation set.",
      "topics": [
        "separate",
        "separate,Spectra-method",
        "separate.Spectra"
      ]
    },
    {
      "page": "snv",
      "title": "Standard and Robust Normal Variate transformations",
      "topics": [
        "rnv",
        "snv"
      ]
    },
    {
      "page": "Spectra",
      "title": "Constructor for the Spectra class.",
      "topics": [
        "Spectra"
      ]
    },
    {
      "page": "Spectra-class",
      "title": "Spectra* classes",
      "topics": [
        "as.data.frame.SpatialSpectra",
        "as.data.frame.Spectra",
        "as.data.frame.SpectraDataFrame",
        "names.SpectraDataFrame",
        "names<-.SpectraDataFrame",
        "print,Spectra-method",
        "show,Spectra-method",
        "spectacles",
        "Spectra-class",
        "SpectraDataFrame-class"
      ]
    },
    {
      "page": "spectra-methods",
      "title": "Retrieves or sets the spectra of a 'Spectra*' objects.",
      "topics": [
        "spectra",
        "spectra,data.frame-method",
        "spectra,Spectra-method",
        "spectra,SpectraDataFrame-method",
        "spectra-methods",
        "spectra<-",
        "spectra<-,data.frame-method",
        "spectra<-,Spectra-method"
      ]
    },
    {
      "page": "SpectraDataFrame",
      "title": "Constructor for the SpectraDataFrame class.",
      "topics": [
        "SpectraDataFrame"
      ]
    },
    {
      "page": "splice",
      "title": "Splice correction of a spectra collected using ASD hardware",
      "topics": [
        "splice",
        "splice,Spectra-method"
      ]
    },
    {
      "page": "split",
      "title": "Split a Spectra* object using factors",
      "topics": [
        "split",
        "split,Spectra-method",
        "split.Spectra"
      ]
    },
    {
      "page": "subset",
      "title": "Subset SpectraDataFrame object",
      "topics": [
        "subset",
        "subset,SpectraDataFrame-method",
        "subset.SpectraDataFrame"
      ]
    },
    {
      "page": "summary",
      "title": "Summary",
      "topics": [
        "print.summary.Spectra",
        "summary",
        "summary.Spectra"
      ]
    },
    {
      "page": "wl",
      "title": "Retrieves or sets the wavelengths of a 'Spectra*' object.",
      "topics": [
        "wl",
        "wl,Spectra-method",
        "wl<-",
        "wl<-,data.frame-method",
        "wl<-,Spectra-method"
      ]
    },
    {
      "page": "wl_units",
      "title": "Wavelengths of Spectra* objects",
      "topics": [
        "wl_units",
        "wl_units,Spectra-method",
        "wl_units<-",
        "wl_units<-,Spectra-method"
      ]
    }
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      "filename": "quickstart.html",
      "title": "A quick start to the spectacles package",
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      "engine": "knitr::rmarkdown",
      "headings": [
        "Converting data to a SpectraDataFrame",
        "Accessing the different elements of the SpectraDataFrame object",
        "General information about the SpectraDataFrame",
        "Subsetting",
        "Accessing specific properties of Spectra objects",
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      "filename": "interfacing-with-caret.html",
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      "headings": [
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